Quick Install

You can easily install TileDB-VCF via conda or use one of our Docker images.
Python
CLI
Docker
# Install the TileDB-VCF python package
conda install -c conda-forge -c bioconda -c tiledb tiledbvcf-py
​
# Verify the installation
python -c "import tiledbvcf; print(tiledbvcf.version)"
# Install the CLI and shared library
conda install -c conda-forge -c bioconda -c tiledb libtiledbvcf
​
# Verify the installation
tiledbvcf version
Pre-built Docker images are available on Docker Hub.
Available images
​tiledbvcf-cli for the CLI
​tiledbvcf-py for the Python package
Supported tags
latest: latest stable release (recommended)
dev: development version
v0.x.x for a specific version
Example usage
# CLI
docker run --rm tiledb/tiledbvcf-cli list \
  --uri s3://tiledb-inc-demo-data/tiledbvcf-arrays/v4/vcf-samples-20
  
# Python
docker run -it --rm tiledb/tiledbvcf-py
Installation
Build from Source
Last modified 1yr ago